7K5E
1.75 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor JAG-5-7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 129.852, 194.284, 203.140 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.360 - 1.750 |
R-factor | 0.1832 |
Rwork | 0.182 |
R-free | 0.21270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5d8o |
RMSD bond length | 0.009 |
RMSD bond angle | 0.893 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.17rc2_3615) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.570 | 48.570 | 1.780 |
High resolution limit [Å] | 1.750 | 9.590 | 1.750 |
Rmerge | 0.108 | 0.065 | 1.022 |
Total number of observations | 1740410 | 11405 | 85477 |
Number of reflections | 256167 | 1703 | 12610 |
<I/σ(I)> | 10.1 | 25.9 | 1.8 |
Completeness [%] | 100.0 | 99 | 100 |
Redundancy | 6.8 | 6.7 | 6.8 |
CC(1/2) | 0.997 | 0.996 | 0.787 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 291 | 30% (v/v) PEG 200, 0.1M sodium acetate, 0.1M NaCl |