7K0G
1.85 A resolution structure of SARS-CoV 3CL protease in complex with deuterated GC376
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-05-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 107.882, 45.192, 53.518 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.640 - 1.850 |
R-factor | 0.1942 |
Rwork | 0.192 |
R-free | 0.23950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6w2a |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18.1_3863) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.940 | 47.940 | 1.890 |
High resolution limit [Å] | 1.850 | 9.060 | 1.850 |
Rmerge | 0.076 | 0.041 | 1.205 |
Total number of observations | 187771 | 1630 | 11922 |
Number of reflections | 23106 | 240 | 1411 |
<I/σ(I)> | 13.7 | 38.9 | 1.9 |
Completeness [%] | 100.0 | 99 | 100 |
Redundancy | 8.1 | 6.8 | 8.4 |
CC(1/2) | 0.998 | 0.997 | 0.679 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 30% (w/v) PEG 3350, 0.2 M ammonium citrate |