7JU5
Structure of RET protein tyrosine kinase in complex with pralsetinib
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.449, 80.329, 79.840 |
Unit cell angles | 90.00, 100.25, 90.00 |
Refinement procedure
Resolution | 78.570 - 1.900 |
R-factor | 0.191 |
Rwork | 0.188 |
R-free | 0.24750 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 6nec |
RMSD bond length | 0.017 |
RMSD bond angle | 1.823 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | REFMAC (5.8.0073) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 1.930 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.062 | 0.532 |
Rmeas | 0.073 | 0.660 |
Rpim | 0.039 | 0.383 |
Number of reflections | 47291 | 2337 |
<I/σ(I)> | 17.18 | 2 |
Completeness [%] | 95.2 | 89.4 |
Redundancy | 3.3 | 2.6 |
CC(1/2) | 0.860 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 295 | 21-30% PEG3350 0.1M Na Citrate pH 5.5 |