7JS5
Phospholipase D engineered mutant (TNYR) inactive enzyme (H168A) bound to 1-inositol phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.953724 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.127, 83.151, 99.393 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.190 - 2.500 |
R-factor | 0.1766 |
Rwork | 0.172 |
R-free | 0.26450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ze4 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.936 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.190 | 2.279 |
High resolution limit [Å] | 2.500 | 2.200 |
Rmerge | 0.174 | 2.066 |
Number of reflections | 17538 | 2516 |
<I/σ(I)> | 14.38 | |
Completeness [%] | 99.9 | 99.72 |
Redundancy | 13.6 | |
CC(1/2) | 0.998 | 0.723 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6 | 298 | 15% PEG6000, 100 mM MES, pH 6.0 |