7JKP
Human PrimPol misinserting dATP opposite the 8-oxoguanine lesion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-19 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.979200 |
Spacegroup name | P 1 |
Unit cell lengths | 52.225, 65.656, 74.482 |
Unit cell angles | 69.30, 82.87, 88.06 |
Refinement procedure
Resolution | 69.170 - 2.592 |
R-factor | 0.2504 |
Rwork | 0.248 |
R-free | 0.30660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5l2x |
RMSD bond length | 0.011 |
RMSD bond angle | 0.495 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.170 | 2.690 |
High resolution limit [Å] | 2.580 | 2.580 |
Rmerge | 0.106 | |
Number of reflections | 27189 | 2898 |
<I/σ(I)> | 7.6 | |
Completeness [%] | 94.0 | |
Redundancy | 3.4 | |
CC(1/2) | 0.995 | 0.523 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 225- 250 mM CaCl2 16 -19% PEG 3350 |