7JHO
Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with UDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 87 |
Detector technology | PIXEL |
Collection date | 2017-06-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 137.651, 76.511, 82.704 |
Unit cell angles | 90.00, 109.93, 90.00 |
Refinement procedure
Resolution | 29.220 - 1.850 |
R-factor | 0.1671 |
Rwork | 0.165 |
R-free | 0.21110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jhi |
RMSD bond length | 0.006 |
RMSD bond angle | 0.901 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.880 |
High resolution limit [Å] | 1.850 | 5.010 | 1.850 |
Rmerge | 0.087 | 0.041 | 1.022 |
Rmeas | 0.094 | 0.045 | 1.143 |
Rpim | 0.037 | 0.017 | 0.499 |
Number of reflections | 68984 | 3557 | 3401 |
<I/σ(I)> | 7.5 | ||
Completeness [%] | 99.8 | 100 | 97.7 |
Redundancy | 6.4 | 6.5 | 4.9 |
CC(1/2) | 0.998 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 24% PEG1500, 20% glycerol |