7JHL
Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with UDP-N-acetylglucosamine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 87 |
| Detector technology | PIXEL |
| Collection date | 2017-10-06 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.00 |
| Spacegroup name | I 1 2 1 |
| Unit cell lengths | 82.654, 76.638, 134.206 |
| Unit cell angles | 90.00, 105.27, 90.00 |
Refinement procedure
| Resolution | 46.420 - 2.260 |
| R-factor | 0.1771 |
| Rwork | 0.175 |
| R-free | 0.22410 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7jhi |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.689 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.29) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 46.420 | 46.420 | 2.330 |
| High resolution limit [Å] | 2.260 | 9.040 | 2.260 |
| Rmerge | 0.152 | 0.054 | 0.978 |
| Rmeas | 0.165 | 0.059 | 1.057 |
| Rpim | 0.063 | 0.023 | 0.398 |
| Total number of observations | 255698 | 4175 | 24126 |
| Number of reflections | 37963 | 633 | 3470 |
| <I/σ(I)> | 9.4 | 22.2 | 2.4 |
| Completeness [%] | 99.9 | 99.1 | 100 |
| Redundancy | 6.7 | 6.6 | 7 |
| CC(1/2) | 0.996 | 0.997 | 0.813 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277 | 24% PEG1500, 20% glycerol |






