7H53
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with NCL-00024387 (A71EV2A-x1255)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-02-19 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94054 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 86.175, 56.564, 64.526 |
Unit cell angles | 90.00, 94.75, 90.00 |
Refinement procedure
Resolution | 64.300 - 1.120 |
R-factor | 0.18453 |
Rwork | 0.183 |
R-free | 0.20603 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.740 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.300 | 1.180 |
High resolution limit [Å] | 1.120 | 1.120 |
Rmerge | 0.075 | 1.823 |
Rmeas | 0.081 | 2.007 |
Rpim | 0.031 | 0.822 |
Total number of observations | 776298 | 77661 |
Number of reflections | 113437 | 13804 |
<I/σ(I)> | 10.5 | 0.7 |
Completeness [%] | 95.6 | |
Redundancy | 6.8 | 5.6 |
CC(1/2) | 0.998 | 0.422 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |