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7FUP

Crystal Structure of human cyclic GMP-AMP synthase in complex with methyl 1-benzoyl-3-methyl-5-(1,2-oxazol-5-yl)pyrazole-4-carboxylate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-10
DetectorPSI PILATUS 6M
Wavelength(s)1.00006
Spacegroup nameP 61 2 2
Unit cell lengths102.353, 102.353, 242.377
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.073 - 2.411
R-factor0.1809
Rwork0.178
R-free0.22670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.16rc1_3531)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]83.25050.0732.470
High resolution limit [Å]2.41010.7802.410
Rmerge0.2050.0299.900
Rmeas0.2110.03010.444
Total number of observations574971
Number of reflections297464422064
<I/σ(I)>12.8764.420.16
Completeness [%]99.399.395.9
Redundancy19.32913.82617.628
CC(1/2)0.9991.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729310-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals.

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PDB entries from 2024-10-30

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