7FTN
Crystal Structure of human cyclic GMP-AMP synthase in complex with propanedioic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000030 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 100.599, 100.599, 239.854 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 58.906 - 2.001 |
R-factor | 0.1868 |
Rwork | 0.185 |
R-free | 0.22550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 81.890 | 58.906 | 2.050 |
High resolution limit [Å] | 2.000 | 8.950 | 2.000 |
Rmerge | 0.227 | 0.040 | 4.548 |
Rmeas | 0.232 | 0.042 | 4.667 |
Total number of observations | 1066892 | ||
Number of reflections | 49352 | 699 | 3568 |
<I/σ(I)> | 10.79 | 47.96 | 0.34 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 21.618 | 16.479 | 19.822 |
CC(1/2) | 0.999 | 0.999 | 0.280 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 10-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals |