7F9N
Crystal structure of the variable region of Plasmodium RIFIN #4 (PF3D7_1000500) in complex with LAIR1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-10-02 |
Detector | SDMS |
Wavelength(s) | 0.97894 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 73.435, 73.435, 341.046 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.670 - 3.000 |
R-factor | 0.2674 |
Rwork | 0.264 |
R-free | 0.33020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3kgr |
RMSD bond length | 0.016 |
RMSD bond angle | 1.394 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Number of reflections | 19913 | 19913 |
<I/σ(I)> | 21.7 | |
Completeness [%] | 100.0 | |
Redundancy | 21 | |
CC(1/2) | 0.997 | 0.637 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M di-ammonium hydrogen citrate, 20% w/v PEG 3,350 |