Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7F79

Crystal structure of glutamate dehydrogenase 3 from Candida albicans in complex with alpha-ketoglutarate and NADPH

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNFPSS BEAMLINE BL19U1
Synchrotron siteNFPSS
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-10-31
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9793
Spacegroup nameP 1 21 1
Unit cell lengths96.279, 155.224, 98.807
Unit cell angles90.00, 95.50, 90.00
Refinement procedure
Resolution44.800 - 2.700
R-factor0.2013
Rwork0.199
R-free0.24720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5xvx
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMoRDa
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.800
High resolution limit [Å]2.7005.8102.700
Rmerge0.1560.0540.984
Rmeas0.1850.0641.167
Rpim0.0980.0340.620
Total number of observations274007
Number of reflections7998080887950
<I/σ(I)>3.8
Completeness [%]98.59898.7
Redundancy3.43.53.4
CC(1/2)0.9850.528
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72890.2 M DL-Malic acid, pH 7.0, and 20% PEG 3350

238268

PDB entries from 2025-07-02

PDB statisticsPDBj update infoContact PDBjnumon