7EZT
The structure and functional mechanism of nucleotide regulated acetylhexosaminidase Am2136 from Akkermansia muciniphila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-06-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97930 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 96.200, 119.505, 161.931 |
Unit cell angles | 90.00, 103.40, 90.00 |
Refinement procedure
Resolution | 26.440 - 2.810 |
R-factor | 0.195 |
Rwork | 0.194 |
R-free | 0.24790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jqf |
RMSD bond length | 0.009 |
RMSD bond angle | 1.352 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.020 |
High resolution limit [Å] | 2.810 | 2.810 |
Rpim | 0.065 | 0.244 |
Number of reflections | 86269 | 8562 |
<I/σ(I)> | 11.6 | 3 |
Completeness [%] | 99.2 | |
Redundancy | 13.7 | |
CC(1/2) | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 0.2M Li2SO4, 25% w/v PEG3350, 0.1M HEPES, pH7.5 |