7EWW
Crystal structure of Ebinur Lake virus cap snatching endonuclease (N52A mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.988, 70.800, 70.272 |
Unit cell angles | 90.00, 89.48, 90.00 |
Refinement procedure
Resolution | 19.990 - 2.340 |
R-factor | 0.2102 |
Rwork | 0.208 |
R-free | 0.24610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xi5 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19_4080) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.420 |
High resolution limit [Å] | 2.340 | 5.040 | 2.340 |
Rmerge | 0.088 | 0.059 | 0.599 |
Rmeas | 0.100 | 0.067 | 0.681 |
Rpim | 0.047 | 0.031 | 0.315 |
Total number of observations | 65861 | ||
Number of reflections | 15597 | 1384 | 1617 |
<I/σ(I)> | 8.9 | ||
Completeness [%] | 94.1 | 81.7 | 97.5 |
Redundancy | 4.2 | 4.2 | 4.3 |
CC(1/2) | 0.996 | 0.751 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5.3 | 289 | PEG 3350 |