7EHN
Human MTHFD2 in complex with compound 21 and 9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-03-06 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0 |
Spacegroup name | P 65 |
Unit cell lengths | 113.169, 113.169, 113.670 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.390 - 2.250 |
R-factor | 0.2025 |
Rwork | 0.201 |
R-free | 0.23980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ehm |
Data reduction software | HKL-2000 (2.3.10) |
Data scaling software | SCALEPACK |
Phasing software | MOLREP (11.7.02) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.330 |
High resolution limit [Å] | 2.250 | 4.840 | 2.250 |
Rmerge | 0.076 | 0.061 | 0.522 |
Rmeas | 0.091 | 0.073 | 0.633 |
Rpim | 0.048 | 0.039 | 0.352 |
Total number of observations | 111840 | ||
Number of reflections | 38105 | 3654 | 3829 |
<I/σ(I)> | 11 | ||
Completeness [%] | 97.7 | 91.8 | 98.7 |
Redundancy | 2.9 | 3 | 2.9 |
CC(1/2) | 0.991 | 0.752 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.1 | 291.15 | isopropanol, bis-Tris pH 7.1, PEG 200, PEG 3350, glycerol |