7E9M
Crystal Structure of Spindlin1 bound to SPINDOC Docpep3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-01-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97921 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 77.612, 45.541, 85.984 |
Unit cell angles | 90.00, 93.09, 90.00 |
Refinement procedure
Resolution | 38.750 - 2.500 |
R-factor | 0.2061 |
Rwork | 0.204 |
R-free | 0.25320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ns2 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.111 | 0.037 | 0.676 |
Rmeas | 0.137 | 0.045 | 0.844 |
Rpim | 0.079 | 0.026 | 0.498 |
Total number of observations | 61133 | ||
Number of reflections | 20960 | 1102 | 1001 |
<I/σ(I)> | 5.9 | ||
Completeness [%] | 99.4 | 97.3 | 97.7 |
Redundancy | 2.9 | 2.6 | 2.9 |
CC(1/2) | 0.997 | 0.910 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 291 | 0.2M magnesium acetate, 0.1M Sodium cacodylate pH 6.5, 20% PEG 8000 |