7E6F
Crystal structure of PMP-bound form of cysteine desulfurase SufS R376A from Bacillus subtilis in L-cycloserine-inhibition
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 92.800, 92.800, 129.500 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.440 - 2.740 |
R-factor | 0.1669 |
Rwork | 0.165 |
R-free | 0.21250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5zs9 |
RMSD bond length | 0.011 |
RMSD bond angle | 2.055 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.440 | 46.440 | 2.840 |
High resolution limit [Å] | 2.740 | 10.000 | 2.740 |
Rmerge | 0.110 | 0.079 | 0.921 |
Rmeas | 0.113 | 0.082 | 0.945 |
Total number of observations | 353349 | ||
Number of reflections | 17471 | 413 | 1746 |
<I/σ(I)> | 19.74 | 35.69 | 4.39 |
Completeness [%] | 99.9 | 98.3 | 100 |
Redundancy | 20.225 | 15.884 | 20.068 |
CC(1/2) | 0.998 | 0.997 | 0.918 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.1 M Tris-HCl, 50 mM Lithium sulfate, 50%(v/v) PEG200 |