7DVD
The crystal structure of p53 DNA binding domain and PUMA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-07-26 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 |
Unit cell lengths | 68.612, 73.411, 84.408 |
Unit cell angles | 89.94, 89.82, 90.00 |
Refinement procedure
Resolution | 26.280 - 2.590 |
R-factor | 0.2726 |
Rwork | 0.270 |
R-free | 0.31770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wxr |
RMSD bond length | 0.009 |
RMSD bond angle | 1.143 |
Data reduction software | HKL-2000 |
Data scaling software | Coot |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.635 |
High resolution limit [Å] | 2.590 | 2.590 |
Rmerge | 0.323 | |
Number of reflections | 62203 | 2327 |
<I/σ(I)> | 13.506 | |
Completeness [%] | 99.1 | |
Redundancy | 3.7 | |
CC(1/2) | 0.915 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293.15 | 0.1 M Tris (pH 7.0) 20% (w/w) PEG-200 MME |