7DP4
Crystal structure of wild type Brugia malayi thymidylate synthase complexed with 2'-deoxyuridine monophosphate and methotrexate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2013-11-12 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 81.434, 81.434, 105.370 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.855 - 1.500 |
Rwork | 0.177 |
R-free | 0.19140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hvy |
RMSD bond length | 0.005 |
RMSD bond angle | 1.297 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.550 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.049 | 0.491 |
Rmeas | 0.060 | 0.597 |
Rpim | 0.033 | 0.331 |
Number of reflections | 65291 | 6480 |
<I/σ(I)> | 26.06 | 3.16 |
Completeness [%] | 99.7 | 100 |
Redundancy | 5.4 | 5.4 |
CC(1/2) | 0.718 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 273 | 0.1 M HEPES, pH 7.5, 0.9 M sodium citrate |