7DBI
Crystal structure of the peroxisomal acyl-CoA hydrolase MpaH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | AREA DETECTOR |
Collection date | 2019-12-07 |
Detector | SIEMENS-NICOLET |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 64.921, 93.260, 161.275 |
Unit cell angles | 90.00, 95.12, 90.00 |
Refinement procedure
Resolution | 46.630 - 1.990 |
R-factor | 0.1696 |
Rwork | 0.168 |
R-free | 0.19370 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.597 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | CRANK2 |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.630 | 46.630 | 2.020 |
High resolution limit [Å] | 1.990 | 10.890 | 1.990 |
Rmerge | 0.094 | 0.084 | 0.303 |
Rmeas | 0.133 | 0.119 | 0.428 |
Rpim | 0.094 | 0.084 | 0.303 |
Total number of observations | 256693 | 1560 | 12610 |
Number of reflections | 130308 | 843 | 6367 |
<I/σ(I)> | 11.9 | 32.1 | 2.7 |
Completeness [%] | 99.1 | 98.6 | 97.4 |
Redundancy | 2 | 1.9 | 2 |
CC(1/2) | 0.987 | 0.981 | 0.873 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7 | 293 | Imidazole, Calcium acetate, PEG 8000 |