Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7DBG

Yeast CRM1e (apo) in complex with Ran-RanBP1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2020-01-01
DetectorADSC QUANTUM 315
Wavelength(s)0.9792
Spacegroup nameP 43 21 2
Unit cell lengths105.900, 105.900, 304.290
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.120 - 2.060
R-factor0.2023
Rwork0.201
R-free0.22840
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6m6x
RMSD bond length0.004
RMSD bond angle1.273
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.1202.110
High resolution limit [Å]2.0602.060
Number of reflections1077847866
<I/σ(I)>15.5
Completeness [%]100.0
Redundancy25.2
CC(1/2)0.9990.710
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2960.12 M Monosaccharides (20 mM D-Glucose; 20 mM D-Mannose; 20 mM D-Galactose; 20 mM L-Fucose; 20 mM D-Xylose; 20 mM N-Acetyl-D-Glucosamine), 0.1 M buffer system 1 pH 6.5 (sodium HEPES and MOPS), and 50 % Precipitant Mix 2 (40% v/v Ethylene glycol; 20 % w/v PEG 8000)

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon