7DB8
Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase in complex with compound PF-3845
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97930 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 278.005, 297.814, 65.901 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.640 - 2.300 |
R-factor | 0.1691 |
Rwork | 0.168 |
R-free | 0.18640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7daw |
RMSD bond length | 0.008 |
RMSD bond angle | 0.980 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.18.2_3874) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.138 | 0.681 |
Number of reflections | 121928 | 6050 |
<I/σ(I)> | 19 | 4.1 |
Completeness [%] | 99.9 | 100 |
Redundancy | 13.4 | 13.7 |
CC(1/2) | 0.994 | 0.953 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 1.5M (NH4)2SO4, 0.2% PEG 3350, 0.1M HEPES pH 7.5 |