7DAX
Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP013-bound form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-12-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.696, 75.069, 108.253 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.622 - 1.700 |
R-factor | 0.169107160218 |
Rwork | 0.168 |
R-free | 0.19907 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6kem |
RMSD bond length | 0.007 |
RMSD bond angle | 1.280 |
Data reduction software | XDS (Jun 17, 2015) |
Data scaling software | Aimless (0.5.15) |
Phasing software | MOLREP (11.7.02) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.622 | 1.761 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.034 | 0.183 |
Rmeas | 0.365 | |
Number of reflections | 53049 | 5007 |
<I/σ(I)> | 36.69 | 7.94 |
Completeness [%] | 99.5 | 95.77 |
Redundancy | 6.9 | 4.9 |
CC(1/2) | 1.000 | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 293 | 34% (v/v) PPG 400, 80mM Bis-Tris, pH 6.4 |