7CKI
Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with chuangxinmycin and ATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2018-01-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97854 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 61.988, 61.988, 218.066 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.937 - 2.300 |
R-factor | 0.1685 |
Rwork | 0.165 |
R-free | 0.20850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1i6m |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.350 |
High resolution limit [Å] | 2.300 | 6.920 | 2.300 |
Rmerge | 0.415 | 0.125 | 1.634 |
Rmeas | 0.426 | 0.129 | 1.712 |
Rpim | 0.092 | 0.029 | 0.492 |
Number of reflections | 28943 | 871 | 730 |
<I/σ(I)> | 3.5 | ||
Completeness [%] | 100.0 | 99.9 | 99.7 |
Redundancy | 20.2 | 19.6 | 9.3 |
CC(1/2) | 0.997 | 0.845 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.2 | 310 | 1.8 M K2HPO4 |