7BJ8
Structure of L1 with 2-Mercaptomethyl-thiazolidine D-syn-1b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9159 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 105.200, 105.200, 97.960 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.600 - 1.690 |
R-factor | 0.1639 |
Rwork | 0.163 |
R-free | 0.18860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5evd |
RMSD bond length | 0.012 |
RMSD bond angle | 1.123 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.600 | 1.720 |
High resolution limit [Å] | 1.690 | 1.690 |
Rpim | 0.044 | 0.702 |
Number of reflections | 36367 | 1834 |
<I/σ(I)> | 15.1 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 35.6 | |
CC(1/2) | 0.999 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 100 mM Hepes pH 7.75, 2.0 M ammonium sulphate, 1.5% PEG400. 1 ul protein (15 mg/ml) mixed with 1 ul reservoir. |