7B8R
Doxycycline bound structure of bacterial efflux pump.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-12 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.976253 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 108.515, 145.422, 174.173 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.799 - 2.100 |
R-factor | 0.2047 |
Rwork | 0.203 |
R-free | 0.23910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5en5 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.799 | 2.175 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 158834 | 15593 |
<I/σ(I)> | 14.87 | 1.46 |
Completeness [%] | 98.8 | 98.01 |
Redundancy | 13.7 | 14.3 |
CC(1/2) | 0.999 | 0.650 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M MES pH 6.5, 0.21 M NaCl, 11.5% PEG4000 |