7AXP
Structural characterisation of WDR5:CS-VIP8 interaction in cis state 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 99.240, 99.240, 98.520 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 64.765 - 2.432 |
R-factor | 0.2703 |
Rwork | 0.267 |
R-free | 0.33070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6iam |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.16) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.765 | 2.519 |
High resolution limit [Å] | 2.432 | 2.432 |
Rmerge | 0.086 | |
Number of reflections | 155702 | 92 |
<I/σ(I)> | 16.5 | |
Completeness [%] | 99.7 | 0.998 |
Redundancy | 13.6 | 12.8 |
CC(1/2) | 0.996 | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277.15 | 10% (w/v) PEG20000, 20% (v/v) PEG550 MME, 0.02 M sodium formate, 0.02 M ammonium acetate, 0.02 M trisodium citrate, 0.02 M sodium potassium L-tartrate, 0.02 M sodium oxamate |