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7AKG

Crystal structure of STK17B with bound dovitinib

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-06
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.91840
Spacegroup nameP 41 2 2
Unit cell lengths84.289, 84.289, 114.170
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.270 - 2.080
R-factor0.1872
Rwork0.186
R-free0.21900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3lm0
RMSD bond length0.015
RMSD bond angle1.423
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.27047.2702.140
High resolution limit [Å]2.0809.0702.080
Rmerge0.1170.0620.849
Rmeas0.1280.0680.964
Rpim0.0400.0250.329
Number of reflections254283801936
<I/σ(I)>10.72.3
Completeness [%]100.099.4100
Redundancy10.27.78.4
CC(1/2)0.9950.9880.474
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5277.1510% PEG 3350, 0.2M NaCl and 0.1M bis-tris pH 5.5

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