7AD6
Crystal structure of human complement C5 in complex with the K92 bovine knob domain peptide.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-28 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9762 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 204.265, 104.285, 154.880 |
Unit cell angles | 90.00, 124.90, 90.00 |
Refinement procedure
Resolution | 83.770 - 2.750 |
R-factor | 0.2211 |
Rwork | 0.219 |
R-free | 0.25350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5hcc |
RMSD bond length | 0.002 |
RMSD bond angle | 0.540 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHENIX (1.18-3845-000) |
Refinement software | REFMAC (5.5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 83.770 | 2.848 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.019 | 0.204 |
Number of reflections | 138366 | 6877 |
<I/σ(I)> | 28.79 | |
Completeness [%] | 99.9 | |
Redundancy | 2 | |
CC(1/2) | 0.999 | 0.924 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 296 | 0.1 M bicine/Trizma (pH 8.5), 10 % (w/v) PEG 8000, 20 % (v/v) ethylene glycol, 30 mM sodium fluoride, 30 mM sodium bromide and 30 mM sodium iodide. |