7AB0
Apo crystal structure of the MerTK kinase domain
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-12-05 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.979499 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 91.621, 91.604, 71.623 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.044 - 1.740 |
| R-factor | 0.2022 |
| Rwork | 0.200 |
| R-free | 0.24650 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | pdbid 3BRB |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.319 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | AMoRE |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 48.044 | 48.044 | 1.983 |
| High resolution limit [Å] | 1.739 | 5.932 | 1.739 |
| Rmerge | 0.051 | 0.025 | 0.896 |
| Rmeas | 0.055 | 0.027 | 0.984 |
| Rpim | 0.022 | 0.010 | 0.401 |
| Total number of observations | 5461 | 5092 | |
| Number of reflections | 17430 | 871 | 872 |
| <I/σ(I)> | 16.3 | 51.7 | 1.7 |
| Completeness [%] | 93.2 | 99.5 | 67.3 |
| Redundancy | 6.6 | 6.3 | 5.8 |
| CC(1/2) | 1.000 | 1.000 | 0.709 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 8.5 | 293 | 0.1M Tris pH 8.5, 4.3M NaCl |
