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7A2A

Crystal Structure of EGFR-T790M/V948R in Complex with Spebrutinib and EAI001

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2020-06-22
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9999
Spacegroup nameP 21 21 21
Unit cell lengths75.180, 83.730, 92.340
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.840 - 1.900
R-factor0.1954
Rwork0.194
R-free0.21710
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6s8a
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.8402.000
High resolution limit [Å]1.9001.900
Rmeas0.0631.698
Number of reflections466276548
<I/σ(I)>21.342.09
Completeness [%]100.0100
Redundancy13.2714.16
CC(1/2)0.9990.746
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29325 % PEG3350, 100 mM MgSO4, 4 % ethylen glycole, 5.0 mg/mL EGFR-T790M/V948R (in 100 mM NaCl, 25 mM Tris-HCl, 10 % glycerol, 1 mM TCEP, pH 8.0) 1 ul reservoir + 1 ul protein solution)

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PDB entries from 2024-07-17

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