7ZRY
Structure of the 2a splicing variant of the full-length human LSD1 bound to CoREST (delta305)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.999998 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 119.755, 179.747, 234.602 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.120 - 2.700 |
R-factor | 0.221 |
Rwork | 0.220 |
R-free | 0.24060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2v1d |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.120 | 2.760 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.102 | 3.105 |
Number of reflections | 69570 | 701 |
<I/σ(I)> | 12.8 | 0.68 |
Completeness [%] | 100.0 | 98.9 |
Redundancy | 6.9 | 7.2 |
CC(1/2) | 0.999 | 0.307 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 1.0-1.3 M Na/K Tartrate, 0.1 M ADA pH 6.5 |