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7ZOR

Crystal structure of anti-Siglec-15 Fab

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-02
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979
Spacegroup nameC 1 2 1
Unit cell lengths127.020, 60.681, 131.258
Unit cell angles90.00, 107.86, 90.00
Refinement procedure
Resolution62.467 - 3.933
R-factor0.2319
Rwork0.229
R-free0.27340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5vkk
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]62.4674.001
High resolution limit [Å]3.9333.933
Rmerge0.4650.931
Rmeas0.5111.090
Rpim0.2080.552
Number of reflections8960429
<I/σ(I)>6.43.2
Completeness [%]99.999.9
Redundancy6.14.4
CC(1/2)0.8650.511
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29120% (w/v) PEG3350 0.1M HEPES pH7.5 0.2M Magnesium chloride

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PDB entries from 2024-05-15

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