7ZJF
R399E, a mutated form of GDF5, for disease modification of osteoarthritis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-08-26 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00003 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.426, 84.732, 98.448 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.220 - 1.300 |
R-factor | 0.2077 |
Rwork | 0.207 |
R-free | 0.22190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bhk |
RMSD bond length | 0.008 |
RMSD bond angle | 1.010 |
Data reduction software | XDS |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.8 (3-FEB-2022)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.220 | 1.380 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmeas | 0.069 | |
Rpim | 0.023 | 0.436 |
Number of reflections | 75754 | 11997 |
<I/σ(I)> | 11.6 | |
Completeness [%] | 99.9 | 99.2 |
Redundancy | 6.5 | 6.1 |
CC(1/2) | 0.999 | 0.516 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.15 | 293 | 01 M Hepes, 32% PEG 400, 230 mM MgCl2, pH 8.15 |