7Z7D
Tubulin-Todalam-Vinblastine-complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-09-17 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 105.286, 157.296, 182.526 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.600 - 2.000 |
R-factor | 0.2054 |
Rwork | 0.204 |
R-free | 0.23570 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5lxt |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.600 | 2.080 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.072 | 1.274 |
Rmeas | 0.081 | 1.437 |
Rpim | 0.036 | 0.647 |
Number of reflections | 405947 | 64331 |
<I/σ(I)> | 11.6 | 1.02 |
Completeness [%] | 96.2 | |
Redundancy | 4.6 | |
CC(1/2) | 0.998 | 0.386 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine |