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7Y8P

Crystal structure of 4'-selenoRNA duplex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-23
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.1
Spacegroup nameP 1 21 1
Unit cell lengths26.951, 38.107, 31.882
Unit cell angles90.00, 113.47, 90.00
Refinement procedure
Resolution29.250 - 1.500
R-factor0.1634
Rwork0.160
R-free0.19860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ay2
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.25029.2501.540
High resolution limit [Å]1.5006.7001.500
Rmerge0.0800.0530.281
Rmeas0.0950.0640.336
Total number of observations62087
Number of reflections184272001312
<I/σ(I)>11.1821.164.24
Completeness [%]98.594.896.8
Redundancy3.3693.2253.317
CC(1/2)0.9940.9940.946
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293MPD, sodium cacodylate, hexammine cobalt

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