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7XAF

The crystal structure of TrkA kinase in complex with 4^6,14-dimethyl-N-(3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl)-10-oxo-5-oxa-11,14-diaza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclo- tetradecaphan-2-yne-45-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-D
Temperature [K]104.5
Detector technologyPIXEL
Collection date2022-01-04
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.5418
Spacegroup nameP 31 1 2
Unit cell lengths52.116, 52.116, 228.483
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.414 - 3.001
R-factor0.249636509057
Rwork0.244
R-free0.29897
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5h3q
RMSD bond length0.003
RMSD bond angle0.826
Data reduction softwareCrysalisPro
Data scaling softwareCrysalisPro (1.9_1692+SVN)
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692+SVN)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.4203.210
High resolution limit [Å]3.0003.000
Number of reflections73152270
<I/σ(I)>4.5
Completeness [%]100.0
Redundancy4.7
CC(1/2)0.8880.408
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.22890.1M Na2HPO4/KH2PO4 (pH 6.2), 2M NaCl

219869

PDB entries from 2024-05-15

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