7W80
Crystal Structure of the Heterodimeric HIF-2 in Complex with Antagonist Belzutifan
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.192, 98.187, 77.739 |
Unit cell angles | 90.00, 107.16, 90.00 |
Refinement procedure
Resolution | 46.380 - 2.754 |
R-factor | 0.2221 |
Rwork | 0.216 |
R-free | 0.27370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zp4 |
Data reduction software | XDS (Jan 31, 2020) |
Data scaling software | XDS (Jan 31, 2020) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.20.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.000 | 47.000 | 2.900 |
High resolution limit [Å] | 2.754 | 8.710 | 2.754 |
Rmerge | 0.058 | 0.018 | 0.635 |
Rmeas | 0.062 | 0.019 | 0.688 |
Rpim | 0.024 | 0.008 | 0.264 |
Number of reflections | 18363 | 599 | 2681 |
<I/σ(I)> | 22.4 | ||
Completeness [%] | 99.8 | 98.5 | 99.3 |
Redundancy | 6.8 | 5.8 | 6.6 |
CC(1/2) | 0.999 | 1.000 | 0.888 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | Tacsimate, PEG3350 |