7VRI
crystal structure of BRD2-BD2 in complex with guanosine analog
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-31 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.54056 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 52.316, 71.476, 32.028 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 13.790 - 1.500 |
R-factor | 0.1854 |
Rwork | 0.183 |
R-free | 0.22810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xhk |
RMSD bond length | 0.005 |
RMSD bond angle | 0.788 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.18_3855: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 13.790 | 1.480 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.127 | 0.566 |
Number of reflections | 21402 | 857 |
<I/σ(I)> | 14.15 | |
Completeness [%] | 96.3 | 77.3 |
Redundancy | 4 | 2.1 |
CC(1/2) | 0.990 | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 300 | PEG MME 2000, 50mM Tris, 50mM Nacl |