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7UZC

Structure of the SARS-CoV-2 RBD in complex with the mouse antibody Fab fragment, M8a-34

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-19
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameP 1 21 1
Unit cell lengths54.470, 165.165, 93.715
Unit cell angles90.00, 106.63, 90.00
Refinement procedure
Resolution39.230 - 2.200
R-factor0.1733
Rwork0.172
R-free0.24330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7sc1
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.4502.240
High resolution limit [Å]2.2002.200
Rmerge0.1201.611
Rmeas0.1301.746
Rpim0.0480.663
Number of reflections791654396
<I/σ(I)>9.91.2
Completeness [%]98.696.4
Redundancy76.7
CC(1/2)0.9970.608
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2932% v/v tacsimate pH 4.0, 0.1 M sodium acetate trihydrate pH 4.6, 16 % PEG 3350

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