7UUO
Crystal structure of aminoglycoside resistance enzyme ApmA H135A mutant, complex with tobramycin and coenzyme A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 3 |
Unit cell lengths | 108.292, 108.292, 87.726 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.450 - 2.650 |
R-factor | 0.2877 |
Rwork | 0.286 |
R-free | 0.32820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jm2 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.082 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.700 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.144 | 1.610 |
Rpim | 0.052 | 0.605 |
Number of reflections | 33452 | 1674 |
<I/σ(I)> | 16.7 | 1.43 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 8.1 | 7.5 |
CC(1/2) | 0.998 | 0.638 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 298 | 0.1 M sodium acetate pH 4.5, 10% PEG 10K, 2 mM tobramycin |