Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7U4W

The ubiquitin-associated domain of human thirty-eight negative kinase-1 flexibly fused to the 1TEL crystallization chaperone via a 2-glycine linker and crystallized at traditional protein concentration

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-02
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameP 65
Unit cell lengths67.971, 67.971, 55.749
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.480 - 2.100
R-factor0.2469
Rwork0.245
R-free0.27560
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2QAR (for 1TEL) homology model (UBA)
RMSD bond length0.004
RMSD bond angle0.565
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.4802.175
High resolution limit [Å]2.1002.100
Rmerge0.0411.088
Rmeas0.0421.129
Rpim0.0110.297
Number of reflections8522820
<I/σ(I)>28.142.27
Completeness [%]98.396.24
Redundancy14.514.1
CC(1/2)1.0000.923
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52981.2 uL of 15 mg/mL protein combined with 1.2 uL of 100 mM Bis-Tris, pH 6.50, 750 mM Mg-Formate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon