7TQ1
Crystal structure of adaptive laboratory evolved sulfonamide-resistant Dihydropteroate Synthase (DHPS) from Escherichia coli in complex with 6-hydroxymethylpterin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97913 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 77.884, 84.571, 175.486 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.770 - 2.730 |
R-factor | 0.2357 |
Rwork | 0.233 |
R-free | 0.28800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ajz |
RMSD bond length | 0.004 |
RMSD bond angle | 0.646 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.800 |
High resolution limit [Å] | 2.730 | 2.750 |
Rmerge | 0.189 | 0.945 |
Rpim | 0.081 | 0.764 |
Number of reflections | 14996 | 629 |
<I/σ(I)> | 10.05 | 1.04 |
Completeness [%] | 95.4 | 82.2 |
Redundancy | 6.6 | |
CC(1/2) | 1.000 | 0.764 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 25% (w/v) PEG 3350, 0.2 M magnesium chloride, 0.1 M Tris pH 8.5, 2 mM 6-hydroxymethyl- 7,8-dihydropterin diphosphate + 2mM para-aminobenzoic acid |