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7TBC

Crystal structure of Plasmepsin X from Plasmodium falciparum in complex with WM382

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-15
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.95373
Spacegroup nameP 32 2 1
Unit cell lengths109.320, 109.320, 118.310
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.620 - 2.760
R-factor0.1982
Rwork0.197
R-free0.22800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7tbb
RMSD bond length0.003
RMSD bond angle0.561
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.6302.910
High resolution limit [Å]2.7602.760
Rpim0.0300.496
Number of reflections212892860
<I/σ(I)>12.5
Completeness [%]99.093.6
Redundancy22.66.5
CC(1/2)0.9990.936
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529312.5% (v/v) 2-methyl-2,4-pentanediol, 0.1M bicine-tris pH 8.5, 2.85% (v/v) diethylene glycol, 6.35% (v/v) pentaethylene glycol, 12.5% (w/v) polyethylene glycol 1000, 12.5% (w/v) polyethylene glycol 3350, 5.2% (v/v) tetraethylene glycol, 4.1% (v/v) triethylene glycol

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