7SA7
Crystal structure of the apo SH2 domains of Syk
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.2.2 |
| Synchrotron site | ALS |
| Beamline | 8.2.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-12-09 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.999816 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 143.882, 153.881, 85.472 |
| Unit cell angles | 90.00, 91.05, 90.00 |
Refinement procedure
| Resolution | 45.780 - 3.200 |
| R-factor | 0.2711 |
| Rwork | 0.270 |
| R-free | 0.30390 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1a81 |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.661 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.780 | 3.314 |
| High resolution limit [Å] | 3.200 | 3.200 |
| Rmerge | 0.323 | 2.097 |
| Number of reflections | 30660 | 3029 |
| <I/σ(I)> | 7.47 | |
| Completeness [%] | 99.7 | |
| Redundancy | 8.3 | |
| CC(1/2) | 0.988 | 0.842 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | Protein- 35mg/mL in 10mM HEPES pH 7.0, 50mM NaCl, 5% glycerol and 1mM TCEP Crystal conditions-0.2M sodium nitrate and 10% w/v PEG 3350 Cryoprotectant-0.2M sodium nitrate, 20% PEG 3350, and 20% glycerol |






