7ROT
Plasmodium falciparum tyrosyl-tRNA synthetase, S234C mutant, in complex with ML901-Tyr
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 138.188, 47.679, 140.630 |
Unit cell angles | 90.00, 94.45, 90.00 |
Refinement procedure
Resolution | 46.740 - 2.200 |
R-factor | 0.207 |
Rwork | 0.205 |
R-free | 0.23770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ror |
RMSD bond length | 0.004 |
RMSD bond angle | 0.571 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.330 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmeas | 0.115 | 1.196 |
Rpim | 0.061 | 0.621 |
Number of reflections | 46975 | 4078 |
<I/σ(I)> | 8.5 | 1.6 |
Completeness [%] | 99.9 | |
Redundancy | 6.8 | |
CC(1/2) | 0.998 | 0.854 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2.25 M sodium malonate, pH 6.5, 2 mM TCEP |