7QPT
Botulinum neurotoxin A4 cell binding domain in complex with GD1a oligosaccharide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-30 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 61 |
Unit cell lengths | 94.677, 94.677, 181.209 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 81.990 - 2.300 |
R-factor | 0.205 |
Rwork | 0.203 |
R-free | 0.24750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6f0p |
RMSD bond length | 0.003 |
RMSD bond angle | 0.656 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.600 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rpim | 0.043 | 0.366 |
Number of reflections | 40672 | 3862 |
<I/σ(I)> | 12.1 | |
Completeness [%] | 99.7 | 97.5 |
Redundancy | 39.2 | |
CC(1/2) | 0.998 | 0.644 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.2 | 289.15 | 0.2 M NaAcO 3H2O, 20% w/v PEG 3350 |