Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7Q1H

Variant D312N of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the substrate OMP at 1.31 Angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2021-10-05
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.68880
Spacegroup nameC 2 2 21
Unit cell lengths77.360, 116.318, 62.091
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.660 - 1.310
R-factor0.1459
Rwork0.144
R-free0.17780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7ov0
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]34.65034.6501.320
High resolution limit [Å]1.31010.0001.310
Rmerge0.0580.0220.998
Rmeas0.0660.0261.126
Total number of observations300507
Number of reflections664851611514
<I/σ(I)>14.5956.61.66
Completeness [%]98.587.599.5
Redundancy4.523.3544.585
CC(1/2)0.9990.9990.655
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293100 mM Tris/HCl pH 7.0, 1.7 - 1.9 M Ammonium sulfate, 10 mM Glutathion, 5% (w/v) Glycerol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon