7PS9
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Iberdomide (CC-220)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-03-14 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.9999 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 56.001, 58.850, 88.583 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 34.760 - 1.800 |
| R-factor | 0.1956 |
| Rwork | 0.193 |
| R-free | 0.24620 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4v2y |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.546 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0266) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 34.760 | 1.910 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.135 | 1.542 |
| Rmeas | 0.141 | 1.611 |
| Number of reflections | 27318 | 4220 |
| <I/σ(I)> | 11.24 | 1.21 |
| Completeness [%] | 97.7 | 94.9 |
| Redundancy | 12.5 | 11 |
| CC(1/2) | 0.998 | 0.845 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.5 M (NH4)H2PO4 |






