7PDQ
Crystal structure of a mutated form of RXRalpha ligand binding domain in complex with LG100268 and a coactivator fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.99998 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 68.430, 68.430, 105.615 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.390 - 1.580 |
R-factor | 0.1734 |
Rwork | 0.172 |
R-free | 0.19540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6sti |
RMSD bond length | 0.016 |
RMSD bond angle | 1.620 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.390 | 1.635 |
High resolution limit [Å] | 1.579 | 1.579 |
Number of reflections | 34564 | 2903 |
<I/σ(I)> | 32.76 | |
Completeness [%] | 98.3 | |
Redundancy | 22 | |
CC(1/2) | 1.000 | 0.812 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 26% PEG3350, 0.2M NaF |